Healthy Vegan Apple Pancakes
This post may contain affiliate links. As an Amazon Associate, I earn from qualifying purchases. Please read my disclosure.My gluten-free and healthy vegan apple pancakes are the perfect weekend treat, with a sweet, fluffy texture, and ready in just 30 minutes. I make them with gluten-free flour, apple juice, warm spices, and a fresh apple compote that everyone will love.

Come fall, our family tradition is to visit an orchard, pick apples, and enjoy warm apple cider with homemade vegan apple crisp or apple pie. While at the orchard, I had the pleasure of tasting their apple cider donuts, which were AMAZING, so I hurried back home to recreate those classic fall flavors in the form of this healthy apple pancake recipe.
I use the same fall spices, such as cinnamon, nutmeg, cloves, and ginger, to make a light batter with apple juice and gluten-free flour and top them with a sweet apple compote. The combination tastes just like those apple cider donuts and pairs perfectly with my apple carrot smoothie for a healthy breakfast or brunch.
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👩🏽🍳 Why I Love This Recipe
I love making delicious baked goods during the winter season with all the warm flavors and fresh fruits available. Apples, pears, pumpkins, butternut squash, and rhubarb have their natural sweetness that makes tons of sweet treats taste amazing with cinnamon, nutmeg, cloves, vanilla, and anise. I am forever happy baking with all these ingredients, and these healthy apple pancakes are my newest creation that my family absolutely loves. Not only are they perfectly sweet with a soft, fluffy texture, but they are gluten-free, high in fiber, and 100% vegan.
Making these pancakes is a breeze. I create an egg substitute by mixing flax seeds and water together, and make the wet mixture in a separate bowl with coconut oil, soy milk, brown sugar, apple juice, and fall spices. Then I gradually pour them both into the flour mixture until a smooth batter forms. The process is just like every other pancake recipe, but with this one, I use flax seeds and soy milk instead of eggs and whole milk to keep the recipe vegan, and the pancakes still have the same fluffy texture.
I guarantee these will be some of the best apple cider pancakes you will ever make! Even my dairy-loving friends devour these easy vegan apple cinnamon pancakes. A perfect fall breakfast for a Saturday morning or for a holiday brunch, but really great any time of year. I usually make a double batch of them on Saturday mornings because they go down so well and keep for a few days without losing their soft, fluffy texture, which is great for Monday’s breakfast. Whether you’re a vegan or not, my 30-minute apple cider pancakes are too good to resist!
🥘 Ingredients
My gluten-free apple pancakes require wholesome ingredients that I usually have in my pantry. Here is what I use:

For The Vegan Apple Pancakes Recipe
Flax Seeds and Water: To make an egg substitute, I combine ground flax seeds with water to form a flax egg. It provides structure for this eggless apple pancake recipe, just like an egg would. Ground chia seeds are a good option too. If using ground chia seeds, reduce the amount to 1 tablespoon.
Gluten-Free Flour: For best results, I use an all-purpose gluten-free flour that contains xanthan gum. My favorite brand is Bob’s Red Mill 1:1 All-Purpose Flour for its superb taste and texture. It also happens to be healthier than white flour. If you’re not gluten-free, replace it with white whole wheat flour, spelt flour, or all-purpose flour.
Baking Powder: Baking powder is essential for a fluffy texture! It helps the batter rise as it sits and then again once it hits the hot skillet.
Coconut Oil: I use coconut oil to keep the pancakes tender and moist. Vegetable oil or vegan unsalted butter works too!
Brown Sugar: For this recipe, I use brown sugar to add sweetness and a slight chew to the pancakes! White sugar or coconut sugar are great options too. You can also omit this for even healthier apple pancakes with no added sugar.
Spices: Cinnamon, nutmeg, and cloves provide warmth and spice to these fluffy pancakes! Sometimes I substitute 1 1/2 teaspoons of apple pie spice for the individual spices for convenience.
Vanilla Extract: I only use a touch of vanilla. But it makes the other ingredients shine!
Unsweetened Apple Juice: To give the pancakes a natural sweetness and apple flavor, I use unsweetened apple juice. In the fall, apple cider will do the trick!
Soy Milk: Any non-dairy milk is a great option. I prefer soy or almond milk, but oat milk works too! To make vegan buttermilk, add a teaspoon of apple cider vinegar or lemon juice to the soy milk. If you’re not vegan, whole milk can be used.
For The Cinnamon Apple Topping
Fuji Apple: I prefer Fuji because they are the most delicious apples, but other types, like Honeycrisp, Pink Lady, or Granny Smith, will work too.
Maple Syrup: To give the compote a natural sweetness, I use maple syrup. White or brown sugar works too.
Unsweetened Apple Juice: I use apple juice to make the apples soft while cooking,
Vanilla and Cinnamon: For that something extra, I add a touch of cinnamon and vanilla to take this compote up a notch.
🔪 How To Make
To make vegan gluten-free apple pancakes, just follow my step-by-step instructions below!
Make the Flax Egg: First, I combine the ground flax and water, and let it sit for 10 minutes to thicken.

Sift the Flour: Then, I sift flour and baking powder into a large mixing bowl.

Combine Ingredients: In another medium bowl, I combine the coconut oil, brown sugar, spices, vanilla, apple juice, and soy milk.

Mix Together: Next, I pour the wet ingredients into the dry ingredients along with the flax egg, and whisk until the mixture resembles pancake batter. Then let it rest for 5 minutes.

Make the Topping: For the compote, I add the compote ingredients to a small pot over medium-high heat and stir until the crisp apple mixture softens.

Cook Pancakes: To make the pancakes, I heat a large skillet over medium heat and lightly spray the pan with cooking spray or olive oil or drizzle in some vegetable oil. I scoop 1/4 cup of the batter onto the hot griddle / skillet and cook until small bubbles appear, then flip and cook for 2 to 3 more minutes. Repeat until all the batter is gone.

Serve Pancakes: To finish, I top the hot pancakes with the sweet apple topping and a drizzle of maple syrup. Enjoy!

💭 Expert Tips
My #1 Secret Tip for making this healthy vegan apple pancake recipe is to let the batter rest for a few minutes while I heat the skillet. When the batter sits for 5 to 10 minutes, it makes little air bubbles that help the pancakes cook up light and fluffy. I usually use that time to chop some fruit for topping or pour juice for the kids.
Other Tips To Keep In Mind:
- Mix the batter: I mix the wet and dry ingredients in separate bowls, then pour the wet into a well in the dry. I stir gently so the batter stays smooth without lumps.
- Use the right pan: I cook these apple pancakes on a nonstick pan or griddle. It keeps them from sticking and makes flipping easier.
- Portion easily: I like to use a cookie scoop to measure out the batter. This way, all my pancakes are the same size.
- Flip at the right time: I wait until the edges look dry and bubbles form on top before flipping. That is how I know they are ready for that golden color.
- Clean between batches: I wipe down the skillet between each batch. This keeps the pancakes fresh tasting without any burned bits.
📖 Variations
Being a creative cook, I always like to try different variations of my recipes, and these are some of my favorites for this healthy apple pancake recipe.
Oat Pancakes: For an oaty texture, I substitute 1/4 cup of the gluten-free flour with oat flour and stir in 3/4 cup of grated apples to make these apple oatmeal pancakes even better.
Banana Flavor: I replace 1/4 cup of the apple juice with 1/4 cup of mashed banana and top with diced banana in addition to the apple compote.
Make it with Blueberry: For a boost of antioxidants and color, I add 1/2 cup blueberries to the apple topping mixture, cooking down until it thickens, and then top with additional fresh blueberries! I also drop some blueberries into the pancake batter while it cooks.
🍽 Serving Suggestions
This eggless apple pancake recipe tastes delicious topped with apple compote, but one thing I like to do with pancakes is serve them with extra toppings so everyone can choose any combination of toppings they like. Here are some of my favorite options to serve with apple pancakes:
What’s an apple dessert without a generous drizzle of vegan caramel sauce? It’s such a simple caramel sauce to make, and it takes me just 15 minutes using 5 pantry ingredients that will add a luscious sweet flavor to the pancakes. Vegan honey is also another favorite I make for drizzling over waffles, pancakes, and toast. What’s great about this vegan honey is that I make it with apples and 4 other ingredients, so I can prepare 3 recipes with one bag of apples.
My kids, on the other hand, prefer to eat their pancakes smothered in vegan whipped cream with a healthy drizzle of caramel. Once you try this vegan whipped cream, you’ll be making it again and again! It’s so creamy and delicious. Another house favorite sauce is this silky, smooth homemade vegan chocolate sauce I make with 5 ingredients, which I guarantee you already have in the pantry. Two of them are water and salt.
🧊 Storage Directions
Refrigeration: To chill any leftover pancakes, I simply transfer them to an airtight container and pop them in the fridge for up to 4 days.
Freezing: When I want to store them longer, I wrap each pancake in plastic wrap and stack them in a freezer container or a freezer bag. They freeze for up to 3 months. Thaw overnight in the fridge before reheating.
Reheating: I think the toaster is the best way to reheat these apple pancakes. The skillet over medium heat is another option, and also for 30 second in the microwave.
❓ Recipe FAQs
In my experience, the main cause for dense pancakes is overmixing. I always make sure to incorporate the wet mixtures into the flour mixture until just combined.
This has happened to me before, and there are two reasons why this happens. One, is that the pan/skillet isn’t hot enough when scooping the batter onto it, and the second reason is that the batter is too thin. I make sure to add the wet ingredients bit by bit so that it doesn’t become too runny. We want a thick batter that will hold its shape and not spread too much when cooking.
No, it is not necessary to peel them. However, peeling the apples will result in a smoother compote which my kids actually like.

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🎥 Watch How to Make It
Healthy Vegan Apple Pancakes
Ingredients
For The Pancakes
- 2 tbsp ground flax seeds
- 6 tbsp water
- 1 cup gluten-free flour
- 1 tsp baking powder
- 2 tbsp coconut oil, melted
- 1 tbsp brown sugar
- 1 tsp ground cinnamon
- ¼ tsp nutmeg
- ¼ tsp ground cloves
- 1 tsp vanilla extract
- ½ cup unsweetened apple juice
- ¼ cup soy milk
For The Topping
- 1 fuji apple, diced
- 1 tbsp maple syrup
- 2 tbsp unsweetened apple juice
- ½ tsp vanilla extract
- ½ tsp ground cinnamon
Equipment
Instructions
- In a small mixing bowl mix together the ground flax seeds and water, stir and allow to sit for 10 minutes.
- Sift the flour and baking powder together in a mixing bowl.
- Add the coconut oil through to soy milk to a mixing bowl and whisk together.
- Pour the wet ingredients into the dry ingredients along with the flax seed mixture.
- Whisk until the batter is smooth. Allow batter to rest for 5 minutes before using.
- Meanwhile prepare the apple topping by adding all topping ingredients to a small pot and heat over a medium-high heat. Stir continuously until the apples are tender.
- Heat a skillet over medium heat, lightly spray with olive oil and scoop ¼ cup of pancake batter into the skillet and cook until bubbles begin to appear. Flip and continue to cook for another 2-3 minutes.
- Repeat until all batter has been used.
- Serve pancakes topped with poached apple topping and a sprinkle of powdered sugar.
Notes
- My #1 Secret Tip for making this healthy vegan apple pancake recipe is to let the batter rest for a few minutes while I heat the skillet. When the batter sits for 5 to 10 minutes, it makes little air bubbles that help the pancakes cook up light and fluffy. I usually use that time to chop some fruit for topping or pour juice for the kids.
- Mix the batter: I mix the wet and dry ingredients in separate bowls, then pour the wet into a well in the dry. I stir gently so the batter stays smooth without lumps.
- Use the right pan: I cook these apple pancakes on a nonstick pan or griddle. It keeps them from sticking and makes flipping easier.
- Portion easily: I like to use a cookie scoop to measure out the batter. This way, all my pancakes are the same size.
- Flip at the right time: I wait until the edges look dry and bubbles form on top before flipping. That is how I know they are ready for that golden color.
- Clean between batches: I wipe down the skillet between each batch. This keeps the pancakes fresh tasting without any burned bits.
Oh yum, apple and cinnamon are some of my favourite breakfast flavours, and these look so quick and easy to make – definitely trying these at the weekend, thanks!
Awesome!! Enjoy! 🙂
These sound so amazing!! Love the apple flavor and I am definitely making these this weekend!
Yay!! I can’t wait to hear how you like them!
I love all the fall flavors in these pancakes!
Thanks so much Katherine!
I love apple pancakes (with extra cinnamon for me) and these look like a great vegan version.
Thanks Dannii!! Enjoy!
Apple is my teen’s favourite. I am going to make this delicious pancake for him this weekend. Thanks for the recipe.
Yay!! I’m sure he will love this recipe! 🙂
That is a delicious stack of apple cinnamon pancakes. This makes any Sunday morning perfect, yumm.
Totally agree! Thanks Seema!
Apple and cinnamon are a perfect flavor combination in my book. I love to make and freeze pancakes so they’re always available for my kids. Homemade pancakes are so much better than store bought. Thanks for a great recipe.
I batch cook and freeze pancakes too! They make such an easy breakfast! Glad you liked this recipe!
These pancakes are light and fluffy, yet healthy too! The apple compote on top is perfect! No need for extra maple syrup!
So glad you liked these Alison! And I totally agree – the apples are a much healthier topping but just as sweet as syrup! Win win!
Can’t go wrong with apples and cinnamon! It’s such a great way to start with morning off with these pancakes!
Totally!! Thanks Jamie!
these were so good – i topped them with baked apples for an extra apple punch!
So glad you liked these Heather!! Love the idea of topping them with baked apples – yum!
Fantastic flavours and really simple to make, a perfect breakfast!
Hooray! So happy to hear that Brian! 🙂
Love that you threw apple cider in the mix! Always a great condiment to add to foods. Lovely!
Thanks Michelle! It gives these pancakes the perfect amount of sweetness!
Made this for the family and it was a hit!
Yay!! So happy to hear that Katie! 🙂 It’s a favorite in our family too!
This looks incredible! What a perfect recipe for breakfast! I love the apple cider spin!
Yay!! Thank you so much Jeannette!! I hope you love these when you try them!