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Overhead shot of a small wire rack of healthy apple muffins with raisins, coconut, and a dish towel.
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5 from 20 votes

Healthy Apple Carrot Muffins

When I’m craving a snack that's both nutritious and satisfying, I always turn to my Healthy Apple Carrot Muffins. Made with fresh apples, carrots, cinnamon, unsweetened applesauce, and coconut sugar, they’re naturally sweet and packed with fiber. Whether it’s a quick breakfast, a nutritious treat for my family, or a mid-afternoon pick-me-up, these muffins never disappoint.
Prep Time15 minutes
Cook Time20 minutes
Total Time35 minutes
Course: Baking, Breakfast, Brunch, Snack
Cuisine: American
Diet: Vegetarian
Servings: 20 muffins
Calories: 230kcal
Author: Anjali Shah

Instructions

  • Preheat oven to 375 degrees. Line muffin tins with baking cups; set aside.
  • Sift flour with cinnamon, baking soda, and salt into a large bowl. Stir in sugar until blended.
  • Then add carrots, apples, raisins, coconut, and pecans.
  • Stir mixture until combined.
  • Make a well in center of mixture and pour in eggs, oil, and vanilla all at once.
  • Stir just until mixture is evenly moist. Add applesauce and stir.
  • Spoon batter into muffin tins, filling at least ¾ full. Bake for 18 to 20 minutes or until golden. Serve warm.

Video

https://youtu.be/Y4PqGRxfpYw

Notes

  • My #1 Secret Tip for keeping my healthy apple carrot muffins soft and fluffy is to mix the batter as little as possible! I used to think more mixing meant better muffins, but I quickly learned that overmixing leads to dense, tough bites, not what I want! Now, I gently fold everything together just until combined, even if there are a few lumps. It feels a little too easy, but trust me, this simple trick makes all the difference for light, tender muffins every time.
  • I use a mini muffin pan and scoop 2-3 tablespoons of batter into each cup. They bake in just 11-13 minutes, turning into perfectly bite-sized treats.
  • Paper or silicone liners make cleanup easy, but if I don’t have any, a quick spray of non-stick cooking spray does the trick. No sticking, no mess.
  • If I swap coconut sugar for maple syrup, I mix it in with the wet ingredients. This helps it blend smoothly into the batter for even sweetness.
Nutrition Facts lists 1 large muffin when making 20. Nutritional Information for 30 mini muffins (per muffin): 153 calories, 9.3g fat, 131mg sodium, 16.8g carbs, 2.5g fiber, 7.6g sugar, 2.1g protein

Nutrition

Serving: 1large muffin | Calories: 230kcal | Carbohydrates: 25.3g | Protein: 3.2g | Fat: 14g | Sodium: 197mg | Fiber: 3.7g | Sugar: 11g